other · Figshare · 2021
Structural alignment.
Peter Naniima (114016), Eleonora Naimo (11648366), Sandra Koch (3944867), Ute Curth (8815), Khaled R. Alkharsah (10725016), Luisa J. Ströh (11648369), Anne Binz (309492), Jan-Marc Beneke (11648372), Benjamin Vollmer (6843044), Heike Böning (11648375), Eva Maria Borst (11648378), Prashant Desai (615738), Jens Bohne (7271), Martin Messerle (139659), Rudolf Bauerfeind (152093), Pierre Legrand (196881), Beate Sodeik (191751), Thomas F. Schulz (8355900), Thomas Krey (171661)
Cited by 0Open access
Abstract
<p>Structural alignment of the globular domains of HSV-1 pUL25 (PDB 2F5U), HCMV pUL77, KSHV pORF19, and MuHV-68 pORF19, obtained via a pairwise comparison with the Dali server [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3001423#pbio.3001423.ref037" target="_blank">37</a>]. Magenta or yellow background color indicates the SSE of the individual proteins as determined by the ENDscript server [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3001423#pbio.3001423.ref081" target="_blank">81</a>]; numbering and SSEs of HSV-1 pUL25 are shown above the alignment. Residues in red within black framed boxes are conserved across all 4 herpesvirus orthologs. Lowercase letters denote insertions relative to HSV-1 pUL25. Residues mutated in this study to block pentamerization are colored and framed in cyan and the positively charged residues in the funnel region of the pentameric pORF19<sub>KCTD</sub> in blue. HCMV, human cytomegalovirus; HSV, herpes simplex virus; KSHV, Kaposi’s sarcoma-associated herpesvirus; MuHV-68, murid gammaherpesvirus 68; SSE, secondary structure element.</p> <p>(TIF)</p>
Cite this paper
(114016), P. N., (11648366), E. N., (3944867), S. K., (8815), U. C., (10725016), K. R. A., (11648369), L. J. S., (309492), A. B., (11648372), J.-M. B., (6843044), B. V., (11648375), H. B., (11648378), E. M. B., (615738), P. D., (7271), J. B., (139659), M. M., (152093), R. B., (196881), P. L., (191751), B. S., (8355900), T. F. S., & (171661), T. K. (2021). Structural alignment. Figshare. https://doi.org/10.1371/journal.pbio.3001423.s003
(114016), Peter Naniima, et al. “Structural alignment.” Figshare, 2021, https://doi.org/10.1371/journal.pbio.3001423.s003.
(114016), Peter Naniima, Eleonora Naimo (11648366), Sandra Koch (3944867), Ute Curth (8815), Khaled R. Alkharsah (10725016), Luisa J. Ströh (11648369), Anne Binz (309492), et al. 2021. “Structural alignment.” Figshare. https://doi.org/10.1371/journal.pbio.3001423.s003.
(114016), P.N. et al. (2021) ‘Structural alignment’, Figshare. Available at: https://doi.org/10.1371/journal.pbio.3001423.s003.
@misc{1140162021structural,
title = {{Structural alignment.}},
author = {(114016), Peter Naniima and (11648366), Eleonora Naimo and (3944867), Sandra Koch and (8815), Ute Curth and (10725016), Khaled R. Alkharsah and (11648369), Luisa J. Ströh and (309492), Anne Binz and (11648372), Jan-Marc Beneke and (6843044), Benjamin Vollmer and (11648375), Heike Böning and (11648378), Eva Maria Borst and (615738), Prashant Desai and (7271), Jens Bohne and (139659), Martin Messerle and (152093), Rudolf Bauerfeind and (196881), Pierre Legrand and (191751), Beate Sodeik and (8355900), Thomas F. Schulz and (171661), Thomas Krey},
journal = {Figshare},
year = {2021},
doi = {10.1371/journal.pbio.3001423.s003}
}Made from the index record. Check names, capitalisation and page numbers against the paper. Need another style? AI for Research has over 10,000.