other · Figshare · 2021
Algorithm.
Juan Jiménez-Sánchez (10125734), Álvaro Martínez-Rubio (10125737), Anton Popov (10125740), Julián Pérez-Beteta (3074100), Youness Azimzade (10125743), David Molina-García (10125746), Juan Belmonte-Beitia (5065244), Gabriel F. Calvo (5130290), Víctor M. Pérez-García (3074106)
Cited by 0Open access
Abstract
<p><b>A)</b> Basic algorithm (for implementation purposes). Initialization requires creating a 3D grid, specifying the final simulation time, defining subpopulation traits and setting the initial state. Temporal iterations are then carried out until the end time is reached. At each time step and each voxel, all clonal populations are updated. This updating involves calculating how many cells will proliferate, migrate, mutate or die. When all populations at all voxels have been evaluated, they are updated synchronously. <b>B)</b> Two-dimensional example of model behavior. Synchronous updating results in population increasing, diversifying and spreading at each time step, with probabilities computed according to the biological rules. Compartment color indicates occupancy. Cell color indicates cell type. <b>C)</b> Bottom image is a slice of an actual simulation, with colors indicating occupation. Each voxel contains a variable number of cells and subtypes as depicted above.</p>
Cite this paper
(10125734), J. J.-S., (10125737), Á. M.-R., (10125740), A. P., (3074100), J. P.-B., (10125743), Y. A., (10125746), D. M.-G., (5065244), J. B.-B., (5130290), G. F. C., & (3074106), V. M. P.-G. (2021). Algorithm. Figshare. https://doi.org/10.1371/journal.pcbi.1008266.g001
(10125734), Juan Jiménez-Sánchez, et al. “Algorithm.” Figshare, 2021, https://doi.org/10.1371/journal.pcbi.1008266.g001.
(10125734), Juan Jiménez-Sánchez, Álvaro Martínez-Rubio (10125737), Anton Popov (10125740), Julián Pérez-Beteta (3074100), Youness Azimzade (10125743), David Molina-García (10125746), Juan Belmonte-Beitia (5065244), Gabriel F. Calvo (5130290), and Víctor M. Pérez-García (3074106). 2021. “Algorithm.” Figshare. https://doi.org/10.1371/journal.pcbi.1008266.g001.
(10125734), J.J.-S. et al. (2021) ‘Algorithm’, Figshare. Available at: https://doi.org/10.1371/journal.pcbi.1008266.g001.
@misc{101257342021algorithm,
title = {{Algorithm.}},
author = {(10125734), Juan Jiménez-Sánchez and (10125737), Álvaro Martínez-Rubio and (10125740), Anton Popov and (3074100), Julián Pérez-Beteta and (10125743), Youness Azimzade and (10125746), David Molina-García and (5065244), Juan Belmonte-Beitia and (5130290), Gabriel F. Calvo and (3074106), Víctor M. Pérez-García},
journal = {Figshare},
year = {2021},
doi = {10.1371/journal.pcbi.1008266.g001}
}Made from the index record. Check names, capitalisation and page numbers against the paper. Need another style? AI for Research has over 10,000.